3D structure

PDB id
7NAC (explore in PDB, NAKB, or RNA 3D Hub)
Description
State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model
Experimental method
ELECTRON MICROSCOPY
Resolution
3.04 Å

Loop

Sequence
GGGG*UGCAC
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7NAC_023 not in the Motif Atlas
Homologous match to IL_8C3A_025
Geometric discrepancy: 0.1662
The information below is about IL_8C3A_025
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_07235.3
Basepair signature
cWW-tSH-L-tHS-cWW
Number of instances in this motif group
8

Unit IDs

7NAC|1|1|G|725
7NAC|1|1|G|726
7NAC|1|1|G|727
7NAC|1|1|G|728
*
7NAC|1|1|U|741
7NAC|1|1|G|742
7NAC|1|1|C|743
7NAC|1|1|A|744
7NAC|1|1|C|745

Current chains

Chain 1
25S rRNA

Nearby chains

Chain Q
60S ribosomal protein L18-A

Coloring options:


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