IL_7NAC_028
3D structure
- PDB id
- 7NAC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- GUGAAG*UGGAGGC
- Length
- 13 nucleotides
- Bulged bases
- 7NAC|1|1|G|860
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NAC_028 not in the Motif Atlas
- Geometric match to IL_3FTF_001
- Geometric discrepancy: 0.2286
- The information below is about IL_3FTF_001
- Detailed Annotation
- Quadruple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_71841.1
- Basepair signature
- cWW-tSH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7NAC|1|1|G|833
7NAC|1|1|U|834
7NAC|1|1|G|835
7NAC|1|1|A|836
7NAC|1|1|A|837
7NAC|1|1|G|838
*
7NAC|1|1|U|855
7NAC|1|1|G|856
7NAC|1|1|G|857
7NAC|1|1|A|858
7NAC|1|1|G|859
7NAC|1|1|G|860
7NAC|1|1|C|861
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 5
- RRP17 isoform 1
- Chain 8
- NOC2 isoform 1
- Chain R
- 60S ribosomal protein L19-A
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