IL_7NAC_071
3D structure
- PDB id
- 7NAC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- UUG*CCA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NAC_071 not in the Motif Atlas
- Geometric match to IL_4E59_001
- Geometric discrepancy: 0.1025
- The information below is about IL_4E59_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
7NAC|1|1|U|2410
7NAC|1|1|U|2411
7NAC|1|1|G|2412
*
7NAC|1|1|C|2809
7NAC|1|1|C|2810
7NAC|1|1|A|2811
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 7
- 60S ribosomal subunit assembly/export protein LOC1
- Chain J
- rRNA-processing protein EBP2
- Chain l
- 60S ribosome subunit biogenesis protein NIP7
- Chain r
- Ribosome biogenesis protein NSA2
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