IL_7NAT_035

3D structure

PDB id

7NAT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state A (Consensus refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

UGUAG*CGUAGAGA

Length

13 nucleotides

Bulged bases

7NAT|1|A|A|702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NAT_035 not in the Motif Atlas

Homologous match to IL_5J7L_035

Geometric discrepancy: 0.165

The information below is about IL_5J7L_035

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_01488.3

Basepair signature

cWW-tSS-tSH-L-R-tHS-L-cWW

Number of instances in this motif group

10

Unit IDs

7NAT|1|A|U|684
7NAT|1|A|G|685
7NAT|1|A|U|686
7NAT|1|A|A|687
7NAT|1|A|G|688
*
7NAT|1|A|C|699
7NAT|1|A|G|700
7NAT|1|A|U|701
7NAT|1|A|A|702
7NAT|1|A|G|703
7NAT|1|A|A|704
7NAT|1|A|G|705
7NAT|1|A|A|706

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

30S ribosomal protein S11