IL_7NAW_039

3D structure

PDB id

7NAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state B (Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.05 Å

Loop

Sequence

GCA*UUCCC

Length

8 nucleotides

Bulged bases

7NAW|1|A|C|934

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NAW_039 not in the Motif Atlas

Homologous match to IL_6CZR_410

Geometric discrepancy: 0.2175

The information below is about IL_6CZR_410

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47078.2

Basepair signature

cWW-cWS-L-cWW-L

Number of instances in this motif group

6

Unit IDs

7NAW|1|A|G|933
7NAW|1|A|C|934
7NAW|1|A|A|935
*
7NAW|1|A|U|1380
7NAW|1|A|U|1381
7NAW|1|A|C|1382
7NAW|1|A|C|1383
7NAW|1|A|C|1384

Current chains

Chain A

16S rRNA

Nearby chains

Chain G

Small ribosomal subunit protein uS7

Chain I

Small ribosomal subunit protein uS9