IL_7NHL_042

3D structure

PDB id

7NHL (explore in PDB, NAKB, or RNA 3D Hub)

Description

VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUUG*CAUC

Length

8 nucleotides

Bulged bases

7NHL|1|A|U|1105

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NHL_042 not in the Motif Atlas

Homologous match to IL_6PRV_001

Geometric discrepancy: 0.3573

The information below is about IL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28482.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

7NHL|1|A|G|1103
7NHL|1|A|U|1104
7NHL|1|A|U|1105
7NHL|1|A|G|1106
*
7NHL|1|A|C|1120
7NHL|1|A|A|1121
7NHL|1|A|U|1122
7NHL|1|A|C|1123

Current chains

Chain A

23S rRNA

Nearby chains