IL_7NQH_015
3D structure
- PDB id
- 7NQH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUGCCAG*CGGUCAUAC
- Length
- 16 nucleotides
- Bulged bases
- 7NQH|1|AA|C|258, 7NQH|1|AA|U|260
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NQH_015 not in the Motif Atlas
- Geometric match to IL_4V88_415
- Geometric discrepancy: 0.1904
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7NQH|1|AA|G|241
7NQH|1|AA|U|242
7NQH|1|AA|G|243
7NQH|1|AA|C|244
7NQH|1|AA|C|245
7NQH|1|AA|A|246
7NQH|1|AA|G|247
*
7NQH|1|AA|C|254
7NQH|1|AA|G|255
7NQH|1|AA|G|256
7NQH|1|AA|U|257
7NQH|1|AA|C|258
7NQH|1|AA|A|259
7NQH|1|AA|U|260
7NQH|1|AA|A|261
7NQH|1|AA|C|262
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AE
- Mitochondrial ribosomal protein S5
- Chain AL
- Mitochondrial ribosomal protein S12
- Chain AX
- mRNA
- Chain Ai
- mS33
- Chain BL
- Peptide chain release factor 1-like, mitochondrial
Coloring options: