IL_7NRC_181
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUUAAAA*UC
- Length
- 9 nucleotides
- Bulged bases
- 7NRC|1|S2|A|619
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRC_181 not in the Motif Atlas
- Homologous match to IL_4V88_416
- Geometric discrepancy: 0.1547
- The information below is about IL_4V88_416
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.3
- Basepair signature
- cWW-L-cWW-R-L-R
- Number of instances in this motif group
- 5
Unit IDs
7NRC|1|S2|G|616
7NRC|1|S2|U|617
7NRC|1|S2|U|618
7NRC|1|S2|A|619
7NRC|1|S2|A|620
7NRC|1|S2|A|621
7NRC|1|S2|A|622
*
7NRC|1|S2|U|1104
7NRC|1|S2|C|1105
Current chains
- Chain S2
- 18S rRNA (1771-MER)
Nearby chains
- Chain Sc
- 40S ribosomal protein S23-A
- Chain Se
- 40S ribosomal protein S26-B
Coloring options: