IL_7NRC_194
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGGGG*CAAG
- Length
- 9 nucleotides
- Bulged bases
- 7NRC|1|S2|G|876
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRC_194 not in the Motif Atlas
- Homologous match to IL_4V88_431
- Geometric discrepancy: 0.1204
- The information below is about IL_4V88_431
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
7NRC|1|S2|C|874
7NRC|1|S2|G|875
7NRC|1|S2|G|876
7NRC|1|S2|G|877
7NRC|1|S2|G|878
*
7NRC|1|S2|C|950
7NRC|1|S2|A|951
7NRC|1|S2|A|952
7NRC|1|S2|G|953
Current chains
- Chain S2
- 18S rRNA (1771-MER)
Nearby chains
- Chain Le
- 60S ribosomal protein L30
- Chain SQ
- 40S ribosomal protein S1-A
- Chain SY
- 40S ribosomal protein S13
- Chain Se
- 40S ribosomal protein S26-B
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