IL_7NRC_248
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CACAC*GCGUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRC_248 not in the Motif Atlas
- Homologous match to IL_8P9A_349
- Geometric discrepancy: 0.3094
- The information below is about IL_8P9A_349
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
7NRC|1|LA|C|3162
7NRC|1|LA|A|3163
7NRC|1|LA|C|3164
7NRC|1|LA|A|3165
7NRC|1|LA|C|3166
*
7NRC|1|LA|G|3284
7NRC|1|LA|C|3285
7NRC|1|LA|G|3286
7NRC|1|LA|U|3287
7NRC|1|LA|G|3288
Current chains
- Chain LA
- 25S rRNA (3184-MER)
Nearby chains
No other chains within 10ÅColoring options: