IL_7NSI_060
3D structure
- PDB id
- 7NSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- GAG*CC
- Length
- 5 nucleotides
- Bulged bases
- 7NSI|1|BA|A|479
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NSI_060 not in the Motif Atlas
- Homologous match to IL_5J7L_276
- Geometric discrepancy: 0.2147
- The information below is about IL_5J7L_276
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.15
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 41
Unit IDs
7NSI|1|BA|G|478
7NSI|1|BA|A|479
7NSI|1|BA|G|480
*
7NSI|1|BA|C|588
7NSI|1|BA|C|589
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain B3
- 39S ribosomal protein L30, mitochondrial
- Chain BU
- 39S ribosomal protein L20, mitochondrial isoform 1
- Chain BV
- 39S ribosomal protein L21, mitochondrial isoform d
- Chain BW
- 39S ribosomal protein L22, mitochondrial
- Chain Bg
- 39S ribosomal protein L43, mitochondrial isoform X2
- Chain Bo
- 39S ribosomal protein L52, mitochondrial
Coloring options: