IL_7NWG_004
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- AGAUC*GUCU
- Length
- 9 nucleotides
- Bulged bases
- 7NWG|1|51|U|13
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_004 not in the Motif Atlas
- Geometric match to IL_1CSL_001
- Geometric discrepancy: 0.231
- The information below is about IL_1CSL_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25872.4
- Basepair signature
- cWW-cWW-cWH-cWW
- Number of instances in this motif group
- 5
Unit IDs
7NWG|1|51|A|10
7NWG|1|51|G|11
7NWG|1|51|A|12
7NWG|1|51|U|13
7NWG|1|51|C|14
*
7NWG|1|81|G|143
7NWG|1|81|U|144
7NWG|1|81|C|145
7NWG|1|81|U|146
Current chains
- Chain 51
- 28S Ribosomal RNA
- Chain 81
- 5.8S Ribosomal RNA
Nearby chains
- Chain G3
- L7a
- Chain N3
- Ribosomal protein L15
- Chain X3
- uL23
Coloring options: