IL_7NWG_007
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUCAGUAAC*GUGAACAG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_007 not in the Motif Atlas
- Geometric match to IL_4WF9_008
- Geometric discrepancy: 0.3226
- The information below is about IL_4WF9_008
- Detailed Annotation
- 9x8 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_84694.2
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7NWG|1|51|C|81
7NWG|1|51|U|82
7NWG|1|51|C|83
7NWG|1|51|A|84
7NWG|1|51|G|85
7NWG|1|51|U|86
7NWG|1|51|A|87
7NWG|1|51|A|88
7NWG|1|51|C|89
*
7NWG|1|51|G|95
7NWG|1|51|U|96
7NWG|1|51|G|97
7NWG|1|51|A|98
7NWG|1|51|A|99
7NWG|1|51|C|100
7NWG|1|51|A|101
7NWG|1|51|G|102
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain L3
- L13
- Chain N3
- Ribosomal protein L15
- Chain Q3
- L18
- Chain a3
- uL15
- Chain o3
- eL42
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