IL_7NWG_045
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UAA*UA
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_045 not in the Motif Atlas
- Geometric match to IL_5J7L_032
- Geometric discrepancy: 0.1978
- The information below is about IL_5J7L_032
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_26793.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 16
Unit IDs
7NWG|1|51|U|1341
7NWG|1|51|A|1342
7NWG|1|51|A|1343
*
7NWG|1|51|U|1514
7NWG|1|51|A|1515
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain C3
- uL4
- Chain L3
- L13
- Chain N3
- Ribosomal protein L15
- Chain Q3
- L18
- Chain a3
- uL15
Coloring options: