IL_7NWG_097
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UCC*GAGA
- Length
- 7 nucleotides
- Bulged bases
- 7NWG|1|51|A|3828
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_097 not in the Motif Atlas
- Geometric match to IL_4WF9_083
- Geometric discrepancy: 0.2733
- The information below is about IL_4WF9_083
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
7NWG|1|51|U|3631
7NWG|1|51|C|3632
7NWG|1|51|C|3633
*
7NWG|1|51|G|3827
7NWG|1|51|A|3828
7NWG|1|51|G|3829
7NWG|1|51|A|3830
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain n3
- 60s ribosomal protein l41
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