IL_7NWG_102
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UCAAAGU*AAUGAAG
- Length
- 14 nucleotides
- Bulged bases
- 7NWG|1|51|G|3735
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_102 not in the Motif Atlas
- Homologous match to IL_5TBW_088
- Geometric discrepancy: 0.2844
- The information below is about IL_5TBW_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36973.8
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7NWG|1|51|U|3715
7NWG|1|51|C|3716
7NWG|1|51|A|3717
7NWG|1|51|A|3718
7NWG|1|51|A|3719
7NWG|1|51|G|3720
7NWG|1|51|U|3721
*
7NWG|1|51|A|3732
7NWG|1|51|A|3733
7NWG|1|51|U|3734
7NWG|1|51|G|3735
7NWG|1|51|A|3736
7NWG|1|51|A|3737
7NWG|1|51|G|3738
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain 33
- Transfer RNA; tRNA
- Chain A3
- L8
- Chain i3
- 60S ribosomal protein L36
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