IL_7NWG_112
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CAG*CGUGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_112 not in the Motif Atlas
- Homologous match to IL_8C3A_108
- Geometric discrepancy: 0.2008
- The information below is about IL_8C3A_108
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71241.2
- Basepair signature
- cWW-cWW-tSH-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
7NWG|1|51|C|4243
7NWG|1|51|A|4244
7NWG|1|51|G|4245
*
7NWG|1|51|C|4263
7NWG|1|51|G|4264
7NWG|1|51|U|4265
7NWG|1|51|G|4266
7NWG|1|51|G|4267
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain 71
- 5S ribosomal RNA; 5S rRNA
- Chain D3
- 60S ribosomal protein L5
- Chain J3
- 60S ribosomal protein L11
- Chain T3
- eL21
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