IL_7NWG_212
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CCGUU*AACAGG
- Length
- 11 nucleotides
- Bulged bases
- 7NWG|1|A2|A|1489
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_212 not in the Motif Atlas
- Geometric match to IL_8C3A_009
- Geometric discrepancy: 0.3919
- The information below is about IL_8C3A_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_90170.1
- Basepair signature
- cWW-L-R-L-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
7NWG|1|A2|C|1336
7NWG|1|A2|C|1337
7NWG|1|A2|G|1338
7NWG|1|A2|U|1339
7NWG|1|A2|U|1340
*
7NWG|1|A2|A|1486
7NWG|1|A2|A|1487
7NWG|1|A2|C|1488
7NWG|1|A2|A|1489
7NWG|1|A2|G|1490
7NWG|1|A2|G|1491
Current chains
- Chain A2
- 18S Ribosomal RNA
Nearby chains
- Chain D2
- 40S ribosomal protein S2
- Chain E2
- 40S ribosomal protein S3
- Chain V2
- 40S ribosomal protein S20
- Chain e2
- uS14
- Chain q3
- Transfer RNA; tRNA
- Chain v3
- mRNA
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