IL_7NWG_250
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UUUCC*GGAUA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_250 not in the Motif Atlas
- Geometric match to IL_7VYX_004
- Geometric discrepancy: 0.3296
- The information below is about IL_7VYX_004
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.2
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
7NWG|1|51|U|1671
7NWG|1|51|U|1672
7NWG|1|51|U|1673
7NWG|1|51|C|1674
7NWG|1|51|C|1675
*
7NWG|1|51|G|1680
7NWG|1|51|G|1681
7NWG|1|51|A|1682
7NWG|1|51|U|1683
7NWG|1|51|A|1684
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain L3
- L13
- Chain Q3
- L18
- Chain T3
- eL21
- Chain a3
- uL15
- Chain b3
- eL29
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