IL_7NWG_254
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGGUGAG*CCGCCG
- Length
- 13 nucleotides
- Bulged bases
- 7NWG|1|51|A|2300
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_254 not in the Motif Atlas
- Geometric match to IL_5TBW_476
- Geometric discrepancy: 0.3476
- The information below is about IL_5TBW_476
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31007.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
7NWG|1|51|C|2295
7NWG|1|51|G|2296
7NWG|1|51|G|2297
7NWG|1|51|U|2298
7NWG|1|51|G|2299
7NWG|1|51|A|2300
7NWG|1|51|G|2301
*
7NWG|1|51|C|2334
7NWG|1|51|C|2335
7NWG|1|51|G|2336
7NWG|1|51|C|2337
7NWG|1|51|C|2338
7NWG|1|51|G|2339
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain 81
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain C3
- uL4
- Chain Q3
- L18
- Chain a3
- uL15
- Chain e3
- eL32
- Chain r3
- eL28
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