IL_7NWG_299
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GACU*AUUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWG_299 not in the Motif Atlas
- Geometric match to IL_7VYX_002
- Geometric discrepancy: 0.3084
- The information below is about IL_7VYX_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
7NWG|1|A2|G|1536
7NWG|1|A2|A|1537
7NWG|1|A2|C|1538
7NWG|1|A2|U|1539
*
7NWG|1|A2|A|1594
7NWG|1|A2|U|1595
7NWG|1|A2|U|1596
7NWG|1|A2|C|1597
Current chains
- Chain A2
- 18S Ribosomal RNA
Nearby chains
- Chain G2
- Ribosomal protein S5
- Chain T2
- 40S ribosomal protein uS13
- Chain U2
- S19
- Chain a2
- ribosomal protein eS25
Coloring options: