IL_7NWH_067
3D structure
- PDB id
- 7NWH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- UUAAG*CCAUA
- Length
- 10 nucleotides
- Bulged bases
- 7NWH|1|5|U|2070
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWH_067 not in the Motif Atlas
- Homologous match to IL_5TBW_048
- Geometric discrepancy: 0.2029
- The information below is about IL_5TBW_048
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
7NWH|1|5|U|1905
7NWH|1|5|U|1906
7NWH|1|5|A|1907
7NWH|1|5|A|1908
7NWH|1|5|G|1909
*
7NWH|1|5|C|2067
7NWH|1|5|C|2068
7NWH|1|5|A|2069
7NWH|1|5|U|2070
7NWH|1|5|A|2071
Current chains
- Chain 5
- 28S Ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain F
- uL30
- Chain Q
- eL18
- Chain e
- Ribosomal protein L32
- Chain f
- eL33
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