IL_7NWH_150
3D structure
- PDB id
- 7NWH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- GUU*GUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 7NWH|1|5|G|5049
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWH_150 not in the Motif Atlas
- Homologous match to IL_5TBW_132
- Geometric discrepancy: 0.2701
- The information below is about IL_5TBW_132
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_84428.1
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7NWH|1|5|G|5000
7NWH|1|5|U|5001
7NWH|1|5|U|5002
*
7NWH|1|5|G|5045
7NWH|1|5|U|5046
7NWH|1|5|C|5047
7NWH|1|5|A|5048
7NWH|1|5|G|5049
7NWH|1|5|C|5050
Current chains
- Chain 5
- 28S Ribosomal RNA
Nearby chains
- Chain B
- uL3
- Chain W
- 60S ribosomal protein L24-like protein
- Chain d
- eL31
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