IL_7NWH_246

3D structure

PDB id

7NWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

CGCU*AAAAG

Length

9 nucleotides

Bulged bases

7NWH|1|9|A|1825

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWH|1|9|C|1708
7NWH|1|9|G|1709
7NWH|1|9|C|1710
7NWH|1|9|U|1711
*
7NWH|1|9|A|1822
7NWH|1|9|A|1823
7NWH|1|9|A|1824
7NWH|1|9|A|1825
7NWH|1|9|G|1826

Current chains

Chain 9

18S Ribosomal RNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain XX

40S ribosomal protein uS12

Chain hh

mRNA

Chain ii

Eukaryotic peptide chain release factor subunit 1

Chain n

60s ribosomal protein l41