IL_7NWW_104

3D structure

PDB id

7NWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

UGUUC*GGUAG

Length

10 nucleotides

Bulged bases

7NWW|1|1|U|2689, 7NWW|1|1|U|2690

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NWW_104 not in the Motif Atlas

Homologous match to IL_5J7L_348

Geometric discrepancy: 0.0805

The information below is about IL_5J7L_348

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_23774.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

11

Unit IDs

7NWW|1|1|U|2687
7NWW|1|1|G|2688
7NWW|1|1|U|2689
7NWW|1|1|U|2690
7NWW|1|1|C|2691
*
7NWW|1|1|G|2718
7NWW|1|1|G|2719
7NWW|1|1|U|2720
7NWW|1|1|A|2721
7NWW|1|1|G|2722

Current chains

Chain 1

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain M

50S ribosomal protein L17

Chain O

50S ribosomal protein L19