3D structure

PDB id
7NWW (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.05 Å

Loop

Sequence
UGAAAUCC*GAACUG
Length
14 nucleotides
Bulged bases
7NWW|1|2|U|632
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7NWW_141 not in the Motif Atlas
Homologous match to IL_5J7L_030
Geometric discrepancy: 0.0875
The information below is about IL_5J7L_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_78349.3
Basepair signature
cWW-L-R-L-R-L-R-L-cWW-L-L
Number of instances in this motif group
2

Unit IDs

7NWW|1|2|U|605
7NWW|1|2|G|606
7NWW|1|2|A|607
7NWW|1|2|A|608
7NWW|1|2|A|609
7NWW|1|2|U|610
7NWW|1|2|C|611
7NWW|1|2|C|612
*
7NWW|1|2|G|628
7NWW|1|2|A|629
7NWW|1|2|A|630
7NWW|1|2|C|631
7NWW|1|2|U|632
7NWW|1|2|G|633

Current chains

Chain 2
16S rRNA

Nearby chains

Chain h
30S ribosomal protein S4
Chain l
30S ribosomal protein S8
Chain t
30S ribosomal protein S16
Chain u
30S ribosomal protein S17

Coloring options:


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