IL_7O19_040
3D structure
- PDB id
- 7O19 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGAGUACG*UAAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O19_040 not in the Motif Atlas
- Homologous match to IL_5J7L_038
- Geometric discrepancy: 0.0869
- The information below is about IL_5J7L_038
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_41756.4
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
7O19|1|AA|G|887
7O19|1|AA|G|888
7O19|1|AA|A|889
7O19|1|AA|G|890
7O19|1|AA|U|891
7O19|1|AA|A|892
7O19|1|AA|C|893
7O19|1|AA|G|894
*
7O19|1|AA|U|905
7O19|1|AA|A|906
7O19|1|AA|A|907
7O19|1|AA|A|908
7O19|1|AA|A|909
7O19|1|AA|C|910
Current chains
- Chain AA
- Ribosomal RNA 16S
Nearby chains
- Chain AL
- 30S ribosomal protein S12
Coloring options: