IL_7O19_095
3D structure
- PDB id
- 7O19 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCACU*AAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O19_095 not in the Motif Atlas
- Homologous match to IL_5J7L_272
- Geometric discrepancy: 0.1118
- The information below is about IL_5J7L_272
- Detailed Annotation
- C-loop with bulged stacked A's
- Broad Annotation
- C-loop
- Motif group
- IL_26222.2
- Basepair signature
- cWW-cWS-cSH-tWH-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
7O19|1|BA|G|864
7O19|1|BA|C|865
7O19|1|BA|A|866
7O19|1|BA|C|867
7O19|1|BA|U|868
*
7O19|1|BA|A|909
7O19|1|BA|A|910
7O19|1|BA|A|911
7O19|1|BA|C|912
Current chains
- Chain BA
- Ribosomal RNA 23S
Nearby chains
- Chain BB
- 5S ribosomal RNA; 5S rRNA
- Chain BM
- 50S ribosomal protein L16
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