IL_7O19_153

3D structure

PDB id

7O19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUGUAGGAUAGG*CCC

Length

15 nucleotides

Bulged bases

7O19|1|BA|A|2119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O19_153 not in the Motif Atlas

Geometric match to IL_4V88_406

Geometric discrepancy: 0.3645

The information below is about IL_4V88_406

Detailed Annotation

Isolated near basepair

Broad Annotation

Isolated near basepair

Motif group

IL_76004.2

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

18

Unit IDs

7O19|1|BA|G|2110
7O19|1|BA|U|2111
7O19|1|BA|G|2112
7O19|1|BA|U|2113
7O19|1|BA|A|2114
7O19|1|BA|G|2115
7O19|1|BA|G|2116
7O19|1|BA|A|2117
7O19|1|BA|U|2118
7O19|1|BA|A|2119
7O19|1|BA|G|2120
7O19|1|BA|G|2121
*
7O19|1|BA|C|2177
7O19|1|BA|C|2178
7O19|1|BA|C|2179

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains