IL_7O19_197

3D structure

PDB id

7O19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAGU*GCU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O19_197 not in the Motif Atlas

Geometric match to IL_4N0T_004

Geometric discrepancy: 0.2296

The information below is about IL_4N0T_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_99358.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

7O19|1|AA|G|455
7O19|1|AA|A|456
7O19|1|AA|G|457
7O19|1|AA|U|458
*
7O19|1|AA|G|474
7O19|1|AA|C|475
7O19|1|AA|U|476

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AP

30S ribosomal protein S16