3D structure

PDB id
7O1A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
CCA*UG
Length
5 nucleotides
Bulged bases
7O1A|1|BA|C|995
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7O1A_097 not in the Motif Atlas
Homologous match to IL_5J7L_276
Geometric discrepancy: 0.0951
The information below is about IL_5J7L_276
Detailed Annotation
Single bulged C
Broad Annotation
No text annotation
Motif group
IL_61258.15
Basepair signature
cWW-L-cWW
Number of instances in this motif group
41

Unit IDs

7O1A|1|BA|C|994
7O1A|1|BA|C|995
7O1A|1|BA|A|996
*
7O1A|1|BA|U|1159
7O1A|1|BA|G|1160

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

Chain BJ
50S ribosomal protein L13
Chain BQ
50S ribosomal protein L20
Chain BR
50S ribosomal protein L21
Chain BZ
50S ribosomal protein L30

Coloring options:


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