IL_7O1A_101

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UUAAGUG*CUAAA

Length

12 nucleotides

Bulged bases

7O1A|1|BA|A|1143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_101 not in the Motif Atlas

Geometric match to IL_5J7L_280

Geometric discrepancy: 0.0658

The information below is about IL_5J7L_280

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_57188.5

Basepair signature

cWW-tWW-L-tWW-cWW-cSH

Number of instances in this motif group

5

Unit IDs

7O1A|1|BA|U|1018
7O1A|1|BA|U|1019
7O1A|1|BA|A|1020
7O1A|1|BA|A|1021
7O1A|1|BA|G|1022
7O1A|1|BA|U|1023
7O1A|1|BA|G|1024
*
7O1A|1|BA|C|1140
7O1A|1|BA|U|1141
7O1A|1|BA|A|1142
7O1A|1|BA|A|1143
7O1A|1|BA|A|1144

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BJ

50S ribosomal protein L13