IL_7O1A_151

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUGUAGGAUAGG*CCC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_151 not in the Motif Atlas

Homologous match to IL_3U4M_001

Geometric discrepancy: 0.4851

The information below is about IL_3U4M_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_28037.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

7O1A|1|BA|G|2110
7O1A|1|BA|U|2111
7O1A|1|BA|G|2112
7O1A|1|BA|U|2113
7O1A|1|BA|A|2114
7O1A|1|BA|G|2115
7O1A|1|BA|G|2116
7O1A|1|BA|A|2117
7O1A|1|BA|U|2118
7O1A|1|BA|A|2119
7O1A|1|BA|G|2120
7O1A|1|BA|G|2121
*
7O1A|1|BA|C|2177
7O1A|1|BA|C|2178
7O1A|1|BA|C|2179

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains