IL_7O5B_050
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- AACAAAG*CACAAAU
- Length
- 14 nucleotides
- Bulged bases
- 7O5B|1|A|A|1259, 7O5B|1|A|C|1295
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O5B_050 not in the Motif Atlas
- Homologous match to IL_6CZR_160
- Geometric discrepancy: 0.5836
- The information below is about IL_6CZR_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.1
- Basepair signature
- cWW-tWH-tWH-L-R-L-R-tWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7O5B|1|A|A|1256
7O5B|1|A|A|1257
7O5B|1|A|C|1258
7O5B|1|A|A|1259
7O5B|1|A|A|1260
7O5B|1|A|A|1261
7O5B|1|A|G|1262
*
7O5B|1|A|C|1293
7O5B|1|A|A|1294
7O5B|1|A|C|1295
7O5B|1|A|A|1296
7O5B|1|A|A|1297
7O5B|1|A|A|1298
7O5B|1|A|U|1299
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain G
- 30S ribosomal protein S7
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14
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