IL_7O5B_097
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- GCAC*GAGUGAAAGAGAUC
- Length
- 18 nucleotides
- Bulged bases
- 7O5B|1|X|G|550, 7O5B|1|X|U|554
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O5B_097 not in the Motif Atlas
- Homologous match to IL_4WF9_015
- Geometric discrepancy: 0.159
- The information below is about IL_4WF9_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44923.2
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 10
Unit IDs
7O5B|1|X|G|528
7O5B|1|X|C|529
7O5B|1|X|A|530
7O5B|1|X|C|531
*
7O5B|1|X|G|542
7O5B|1|X|A|543
7O5B|1|X|G|544
7O5B|1|X|U|545
7O5B|1|X|G|546
7O5B|1|X|A|547
7O5B|1|X|A|548
7O5B|1|X|A|549
7O5B|1|X|G|550
7O5B|1|X|A|551
7O5B|1|X|G|552
7O5B|1|X|A|553
7O5B|1|X|U|554
7O5B|1|X|C|555
Current chains
- Chain X
- 23S rRNA (2887-MER)
Nearby chains
- Chain g
- Signal recognition particle protein
- Chain r
- 50S ribosomal protein L22
- Chain t
- 50S ribosomal protein L24
Coloring options: