IL_7O80_125

3D structure

PDB id

7O80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

7O80|1|B5|U|467, 7O80|1|B5|U|681

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7O80|1|B5|A|466
7O80|1|B5|U|467
7O80|1|B5|U|468
7O80|1|B5|C|469
7O80|1|B5|A|470
7O80|1|B5|A|471
7O80|1|B5|C|472
*
7O80|1|B5|G|676
7O80|1|B5|C|677
7O80|1|B5|G|678
7O80|1|B5|C|679
7O80|1|B5|A|680
7O80|1|B5|U|681
7O80|1|B5|U|682
7O80|1|B5|U|683

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BE

60S ribosomal protein L6

Chain Br

Ribosomal protein eL28