IL_7O80_320

3D structure

PDB id

7O80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAAU*AAAUGUG

Length

12 nucleotides

Bulged bases

7O80|1|B5|G|119, 7O80|1|B5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7O80|1|B5|C|118
7O80|1|B5|G|119
7O80|1|B5|A|120
7O80|1|B5|A|121
7O80|1|B5|U|122
*
7O80|1|B5|A|147
7O80|1|B5|A|148
7O80|1|B5|A|149
7O80|1|B5|U|150
7O80|1|B5|G|151
7O80|1|B5|U|152
7O80|1|B5|G|153

Current chains

Chain B5

28S rRNA

Nearby chains

Chain B8

5.8S ribosomal RNA; 5.8S rRNA

Chain BG

Ribosomal protein eL8

Chain BN

Ribosomal protein L15

Chain Bh

uL29