IL_7OBR_010

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUU*AUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OBR_010 not in the Motif Atlas

Homologous match to IL_1MFQ_002

Geometric discrepancy: 0.2934

The information below is about IL_1MFQ_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

78

Unit IDs

7OBR|1|1|G|120
7OBR|1|1|U|121
7OBR|1|1|U|122
*
7OBR|1|1|A|228
7OBR|1|1|U|229
7OBR|1|1|C|230

Current chains

Chain 1

SRP RNA

Nearby chains

Chain u

Signal recognition particle subunit SRP68

Chain z

Signal recognition particle subunit SRP72