IL_7OBR_012

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GACC*GACC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OBR_012 not in the Motif Atlas

Homologous match to IL_1MFQ_004

Geometric discrepancy: 0.2042

The information below is about IL_1MFQ_004

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

7OBR|1|1|G|138
7OBR|1|1|A|139
7OBR|1|1|C|140
7OBR|1|1|C|141
*
7OBR|1|1|G|156
7OBR|1|1|A|157
7OBR|1|1|C|158
7OBR|1|1|C|159

Current chains

Chain 1

SRP RNA

Nearby chains

Chain q

Signal recognition particle 19