IL_7OBR_113

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGUAAC*GGAUAAG

Length

13 nucleotides

Bulged bases

7OBR|1|5|U|2880

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OBR_113 not in the Motif Atlas

Homologous match to IL_8C3A_084

Geometric discrepancy: 0.0864

The information below is about IL_8C3A_084

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65969.4

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

7OBR|1|5|C|2867
7OBR|1|5|G|2868
7OBR|1|5|U|2869
7OBR|1|5|A|2870
7OBR|1|5|A|2871
7OBR|1|5|C|2872
*
7OBR|1|5|G|2877
7OBR|1|5|G|2878
7OBR|1|5|A|2879
7OBR|1|5|U|2880
7OBR|1|5|A|2881
7OBR|1|5|A|2882
7OBR|1|5|G|2883

Current chains

Chain 5

28S rRNA

Nearby chains

Chain n

60s ribosomal protein l41

Chain p

eL43