IL_7OBR_191

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUCU*AC

Length

6 nucleotides

Bulged bases

7OBR|1|5|U|1754, 7OBR|1|5|C|1755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OBR_191 not in the Motif Atlas

Geometric match to IL_4YAZ_008

Geometric discrepancy: 0.3829

The information below is about IL_4YAZ_008

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.5

Basepair signature

cWW-cWW

Number of instances in this motif group

31

Unit IDs

7OBR|1|5|G|1753
7OBR|1|5|U|1754
7OBR|1|5|C|1755
7OBR|1|5|U|1756
*
7OBR|1|5|A|1776
7OBR|1|5|C|1777

Current chains

Chain 5

28S rRNA

Nearby chains

Chain D

60S ribosomal protein L5