IL_7OBR_199
3D structure
- PDB id
- 7OBR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RNC-SRP early complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GGAGC*GAACC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OBR_199 not in the Motif Atlas
- Geometric match to IL_9JA9_001
- Geometric discrepancy: 0.3763
- The information below is about IL_9JA9_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.5
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
7OBR|1|5|G|4742
7OBR|1|5|G|4743
7OBR|1|5|A|4744
7OBR|1|5|G|4745
7OBR|1|5|C|4746
*
7OBR|1|5|G|4954
7OBR|1|5|A|4955
7OBR|1|5|A|4956
7OBR|1|5|C|4957
7OBR|1|5|C|4958
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain f
- eL33
Coloring options: