IL_7OE0_059

3D structure

PDB id

7OE0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pre-30S delta rbfA ribosomal subunit class F

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

GGAG*UGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OE0_059 not in the Motif Atlas

Homologous match to IL_6CZR_169

Geometric discrepancy: 0.3085

The information below is about IL_6CZR_169

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.14

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

36

Unit IDs

7OE0|1|A|G|1416
7OE0|1|A|G|1417
7OE0|1|A|A|1418
7OE0|1|A|G|1419
*
7OE0|1|A|U|1481
7OE0|1|A|G|1482
7OE0|1|A|A|1483
7OE0|1|A|C|1484

Current chains

Chain A

16S rRNA

Nearby chains