IL_7OG4_096

3D structure

PDB id

7OG4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCCUGUAC*GGACAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OG4_096 not in the Motif Atlas

Geometric match to IL_5TBW_116

Geometric discrepancy: 0.2237

The information below is about IL_5TBW_116

Detailed Annotation

8x7 Sarcin-Ricin; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_04346.8

Basepair signature

cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

15

Unit IDs

7OG4|1|XA|C|3119
7OG4|1|XA|C|3120
7OG4|1|XA|C|3121
7OG4|1|XA|U|3122
7OG4|1|XA|G|3123
7OG4|1|XA|U|3124
7OG4|1|XA|A|3125
7OG4|1|XA|C|3126
*
7OG4|1|XA|G|3131
7OG4|1|XA|G|3132
7OG4|1|XA|A|3133
7OG4|1|XA|C|3134
7OG4|1|XA|A|3135
7OG4|1|XA|A|3136
7OG4|1|XA|G|3137

Current chains

Chain XA

16S mitochondrial rRNA

Nearby chains