IL_7OHT_070
3D structure
- PDB id
- 7OHT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UUUUUG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 7OHT|1|1|U|3056, 7OHT|1|1|U|3058
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OHT_070 not in the Motif Atlas
- Homologous match to IL_8CRE_127
- Geometric discrepancy: 0.554
- The information below is about IL_8CRE_127
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21001.1
- Basepair signature
- cWW-L-R-tHW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
7OHT|1|1|U|3054
7OHT|1|1|U|3055
7OHT|1|1|U|3056
7OHT|1|1|U|3057
7OHT|1|1|U|3058
7OHT|1|1|G|3059
*
7OHT|1|1|C|3084
7OHT|1|1|G|3085
7OHT|1|1|A|3086
7OHT|1|1|A|3087
7OHT|1|1|G|3088
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain u
- Ribosome biogenesis protein RLP24
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