IL_7OHX_022

3D structure

PDB id

7OHX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OHX_022 not in the Motif Atlas

Geometric match to IL_1UN6_005

Geometric discrepancy: 0.2014

The information below is about IL_1UN6_005

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

7OHX|1|1|C|803
7OHX|1|1|C|804
7OHX|1|1|G|805
*
7OHX|1|1|C|938
7OHX|1|1|U|939
7OHX|1|1|G|940

Current chains

Chain 1

25S rRNA

Nearby chains

Chain C

60S ribosomal protein L4-A