IL_7OI6_040

3D structure

PDB id

7OI6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CCA*UAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OI6_040 not in the Motif Atlas

Geometric match to IL_2ZNI_001

Geometric discrepancy: 0.1663

The information below is about IL_2ZNI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

7OI6|1|B|C|1627
7OI6|1|B|C|1628
7OI6|1|B|A|1629
*
7OI6|1|B|U|1639
7OI6|1|B|A|1640
7OI6|1|B|G|1641

Current chains

Chain B

mitochondrial Val tRNA

Nearby chains

Chain 6

39S ribosomal protein L38, mitochondrial

Chain P

39S ribosomal protein L18, mitochondrial