IL_7OI9_012
3D structure
- PDB id
- 7OI9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GAG*CUACC
- Length
- 8 nucleotides
- Bulged bases
- 7OI9|1|A|A|316, 7OI9|1|A|U|328, 7OI9|1|A|A|329, 7OI9|1|A|C|330
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OI9_012 not in the Motif Atlas
- Homologous match to IL_5J7L_265
- Geometric discrepancy: 0.0944
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7OI9|1|A|G|315
7OI9|1|A|A|316
7OI9|1|A|G|317
*
7OI9|1|A|C|327
7OI9|1|A|U|328
7OI9|1|A|A|329
7OI9|1|A|C|330
7OI9|1|A|C|331
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain D
- 39S ribosomal protein L2, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
Coloring options: