IL_7OIE_051
3D structure
- PDB id
- 7OIE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CCCUGUAC*GGACAAG
- Length
- 15 nucleotides
- Bulged bases
- 7OIE|1|A|G|1453
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OIE_051 not in the Motif Atlas
- Geometric match to IL_5TBW_116
- Geometric discrepancy: 0.3144
- The information below is about IL_5TBW_116
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.8
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7OIE|1|A|C|1449
7OIE|1|A|C|1450
7OIE|1|A|C|1451
7OIE|1|A|U|1452
7OIE|1|A|G|1453
7OIE|1|A|U|1454
7OIE|1|A|A|1455
7OIE|1|A|C|1456
*
7OIE|1|A|G|1461
7OIE|1|A|G|1462
7OIE|1|A|A|1463
7OIE|1|A|C|1464
7OIE|1|A|A|1465
7OIE|1|A|A|1466
7OIE|1|A|G|1467
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain L
- 39S ribosomal protein L14, mitochondrial
- Chain u
- Mitochondrial assembly of ribosomal large subunit protein 1
Coloring options: