3D structure

PDB id
7OIF (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GUUG*CAUC
Length
8 nucleotides
Bulged bases
7OIF|1|1|U|1061
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OIF_040 not in the Motif Atlas
Homologous match to IL_6PRV_001
Geometric discrepancy: 0.2603
The information below is about IL_6PRV_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_92446.2
Basepair signature
cWW-cWW-R-L-L
Number of instances in this motif group
5

Unit IDs

7OIF|1|1|G|1059
7OIF|1|1|U|1060
7OIF|1|1|U|1061
7OIF|1|1|G|1062
*
7OIF|1|1|C|1076
7OIF|1|1|A|1077
7OIF|1|1|U|1078
7OIF|1|1|C|1079

Current chains

Chain 1
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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